MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Streptococcus acidominimus
19428wB2_HT4
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 288
bases: 2,382,433 bps
CDS: 2,042
rRNA: 4
Repeat region:
tmRNA: 1
tRNA: 46
misc RNA:
Total features: 2,093
Total number of protein coding genes annotated/found:
2,042
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5042|JADGLI010000124.1
SEQF5042_00086
Genome Viewer
NA
AA
213/71
437-225
HTH-type transcriptional regulator ImmR
SEQF5042|JADGLI010000005.1
SEQF5042_01641
Genome Viewer
NA
AA
1167/389
186-1352
hypothetical protein
SEQF5042|JADGLI010000005.1
SEQF5042_01642
Genome Viewer
NA
AA
528/176
1467-1994
Isopentenyl-diphosphate Delta-isomerase
SEQF5042|JADGLI010000005.1
SEQF5042_01643
Genome Viewer
NA
AA
123/41
2181-2303
hypothetical protein
SEQF5042|JADGLI010000005.1
SEQF5042_01644
Genome Viewer
NA
AA
1461/487
4274-2814
Glutamate--tRNA ligase
SEQF5042|JADGLI010000005.1
SEQF5042_01645
Genome Viewer
NA
AA
681/227
5045-4365
hypothetical protein
SEQF5042|JADGLI010000005.1
SEQF5042_01646
Genome Viewer
NA
AA
447/149
5496-5050
putative HTH-type transcriptional regulator
SEQF5042|JADGLI010000005.1
SEQF5042_01647
Genome Viewer
NA
AA
627/209
6695-6069
hypothetical protein
SEQF5042|JADGLI010000005.1
SEQF5042_01648
Genome Viewer
NA
AA
759/253
7484-6726
putative protein
SEQF5042|JADGLI010000005.1
SEQF5042_01649
Genome Viewer
NA
AA
168/56
7964-7797
hypothetical protein
SEQF5042|JADGLI010000005.1
SEQF5042_01650
Genome Viewer
NA
AA
102/34
8145-8044
hypothetical protein
SEQF5042|JADGLI010000005.1
SEQF5042_01651
Genome Viewer
NA
AA
180/60
8457-8278
hypothetical protein
SEQF5042|JADGLI010000005.1
SEQF5042_01652
Genome Viewer
NA
AA
141/47
8600-8460
hypothetical protein
SEQF5042|JADGLI010000005.1
SEQF5042_01653
Genome Viewer
NA
AA
93/31
8759-8667
hypothetical protein
SEQF5042|JADGLI010000005.1
SEQF5042_01654
Genome Viewer
NA
AA
1362/454
10270-8909
DNA repair protein RadA
SEQF5042|JADGLI010000005.1
SEQF5042_01655
Genome Viewer
NA
AA
444/148
10716-10273
Deoxyuridine 5'-triphosphate nucleotidohydrolase
SEQF5042|JADGLI010000005.1
SEQF5042_01656
Genome Viewer
NA
AA
1017/339
11270-12286
Glycerol-3-phosphate dehydrogenase [NAD(P)+]
SEQF5042|JADGLI010000005.1
SEQF5042_01657
Genome Viewer
NA
AA
900/300
12298-13197
UTP--glucose-1-phosphate uridylyltransferase
SEQF5042|JADGLI010000005.1
SEQF5042_01658
Genome Viewer
NA
AA
489/163
13428-13916
hypothetical protein
SEQF5042|JADGLI010000005.1
SEQF5042_01659
Genome Viewer
NA
AA
678/226
14735-14058
Rhomboid protease GluP
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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